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Note: simplest FPs & dyes for which EC, QY & spectra are identified seem in these lists. Fell loose to contact us with further dye info.QY = Quantum Yield, EC = Extinction Coefficient, J(λ) = Overlap Integral, R0 = Förster Radius, 𝓃 = refractive index, κ2 = orientation factorWu & Brand (1994). Resonance Energy Transfer: Methods and Applications. Analytical Biochem. 218& Förster Radii for all monomeric FP pairs within the database Show Donor Acceptor λmaxD Δλem QYD εA QYA J(λ) R0(Å) R0×QYA Show Donor Acceptor λmaxD Δλem QYD εA QYA J(λ) R0 R0×QYA 𝓃 Refractive index of the medium (1.33 is used for the desk calculations) κ2 Orientation factor (0.667 is used for the table calculations) λmaxD Excitation most of the donor (nm) Δλem Separation between emission maxima of the donor and acceptor (nm). FRET pairs with small emission seperation are difficult to use in apply because of overlapping emission. QYD Quantum yield of the donor εA Extinction Coefficient of the acceptor (M-1 cm-1) QYA Quantum yield of the acceptor. FRET acceptors with low quantum yield may supply very low dynamic range between low and high FRET conditions (except you're doing FLIM and only looking on the life of the donor). J(λ) Overlap integral of the donor emission and acceptor excitation spectra, the place: R0 Förster radius: distance at which 50% FRET potency occurs (Å), where: R0×QYA Förster radius multiplied by way of the quantum yield of the acceptor. A useful indication of how huge of an emission height ratio change one might be expecting to peer beneath top FRET vs. low FRET prerequisites Helpful References Wu & Brand (1994). Resonance Energy Transfer: Methods and Applications. Analytical Biochem. 218(1) Bajar et al. (2016). A Guide to Fluorescent Protein FRET Pairs. Sensors 16(9) Mastop et al. (2017). Characterization of a spectrally diverse set of fluorescent proteins as FRET acceptors for mTurquoise2. Sci. Rep. 7(1)
Note: the search bar may be used to select for person words in the table. Use areas to split protein names.